CropXR observation

No description specified

Attributes

Name	Type	Description	PID	ISA Tag	Unit
Input*	Registered Sample List - /templates/16	Existing Samples that this observation is done on.	-	-	-
experiment_id*	String	The name if the output of the step. This can be the experiment id.	-	other_material	-
variable_name	String	Name of the variable.	-	parameter_value	-
variable_accession_number	String	Accession number of the variable in the Crop Ontology.	-	parameter_value	-
trait	String	Name of the (plant or environmental) trait under observation.	-	parameter_value	-
method	String	Name of the method of observation.	-	protocol	-
method_accession_number	String	Accession number of the method in a suitable controlled vocabulary (Crop Ontology, Trait Ontology).	-	parameter_value	-
method_description	String	Textual description of the method, which may extend a method defined in an external reference with specific parameters.	-	parameter_value	-
reference_method	String	URI/DOI or document of reference describing the method.	-	parameter_value	-
instrument	String	Measurement instrument or sensor. Include relevant information such as model and manufacter.	-	parameter_value	-
instrument_metadata	String	Any files related to the observed variabele measurement files. This includes metadata provided by the sensing facility, settings of the sensors.	-	parameter_value	-
scale	String	Name of the scale associated with the variable.	-	other_material_characteristic	-
scale_accession_number	String	Accession number of the scale in a suitable controlled vocabulary (Crop Ontology).	-	other_material_characteristic	-
time_scale	String	Name of the scale or unit of time with which observations of this type were recorded in the data file (for time series studies).	-	other_material_characteristic	-

Name

Type

Description

PID

ISA Tag

Unit

Input*

Registered Sample List - /templates/16

Existing Samples that this observation is done on.

experiment_id*

String

The name if the output of the step. This can be the experiment id.

other_material

variable_name

String

Name of the variable.

parameter_value

variable_accession_number

String

Accession number of the variable in the Crop Ontology.

parameter_value

trait

String

Name of the (plant or environmental) trait under observation.

parameter_value

method

String

Name of the method of observation.

protocol

method_accession_number

String

Accession number of the method in a suitable controlled vocabulary (Crop Ontology, Trait Ontology).

parameter_value

method_description

String

Textual description of the method, which may extend a method defined in an external reference with specific parameters.

parameter_value

reference_method

String

URI/DOI or document of reference describing the method.

parameter_value

instrument

String

Measurement instrument or sensor. Include relevant information such as model and manufacter.

parameter_value

instrument_metadata

String

Any files related to the observed variabele measurement files. This includes metadata provided by the sensing facility, settings of the sensors.

parameter_value

scale

String

Name of the scale associated with the variable.

other_material_characteristic

scale_accession_number

String

Accession number of the scale in a suitable controlled vocabulary (Crop Ontology).

other_material_characteristic

time_scale

String

Name of the scale or unit of time with which observations of this type were recorded in the data file (for time series studies).

other_material_characteristic

CropXR observation

Attributes

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